EBI / SymbNET: from metagenomics to metabolic interactions

These are the materials that will be used for the “SymbNET: from metagenomics to metabolic interactions” workshop. (Note that some sessions do not have any documentation here, though. Instructions for these will be provided during the course.)

The course

For full course information, see: the course website

Contents:

• Assembling data
  • Assembly and Co-assembly
• MAG generation
  • Prerequisites
  • Generating metagenome assembled genomes
• MGnify Genomes Catalogues
  • MAG Catalogues hands-on exercises
• Viral detection and classification
  • Prerequisites
  • 1. Identification of putative viral sequences
  • 2. Detection of viral taxonomic markers
  • 3. Viral taxonomic assignment
• License